Research workbench
Cryoem structure of polytomella F-ATP synthase, C-ring position 2, focussed refinement of fo and peripheral stalk
Analyse Cryoem structure of polytomella F-ATP synthase, C-ring position 2, focussed… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6RD8
- Type
- protein
- Length
- 2,309 residues
- Chains
- 18
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- Q85JD5, K0J903, A0A024FSR7, D7P897, D8V7I7, D7P7X5, H8PGG3
- Ligands
- ZN
Structure
electron microscopy · 9 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| 0 | — | protein | 81 | — | — |
| 1 | — | protein | 595 | — | Q85JD5 |
| 3 | — | protein | 245 | — | K0J903 |
| 5 | — | protein | 123 | — | A0A024FSR7 |
| 6 | — | protein | 124 | — | D7P897 |
| 8 | — | protein | 88 | — | D8V7I7 |
| 9 | — | protein | 96 | — | — |
| A, B, C, D, E, F, G, H, I, J | — | protein | 74 | — | D7P7X5 |
| M | — | protein | 217 | — | H8PGG3 |
Ligands and binding sites
- ZN · Zinc ion · metal · chains 6, M
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6RD8 · CryoEM structure of Polytomella F-ATP synthase, c-ring position 2, focussed refinement of… · the same entry in another collection · chain 9 against 9, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q85JD5
- Every structure of UniProt K0J903
- Every structure of UniProt A0A024FSR7
- Every structure of UniProt D7P897
- Every structure of UniProt D8V7I7
- Every structure of UniProt D7P7X5
- Every structure of UniProt H8PGG3
- Elsewhere: RCSB PDB 6RD8 · PDBe 6RD8 · UniProt Q85JD5 · UniProt K0J903 · UniProt A0A024FSR7 · UniProt D7P897 · UniProt D8V7I7 · UniProt D7P7X5 · UniProt H8PGG3
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