Research workbench
Solid-state NMR structure of outer membrane protein alkl in dmpc lipid bilayers
Analyse Solid-state NMR structure of outer membrane protein alkl in dmpc lipid bilayers in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6QWR
- Type
- protein
- Length
- 211 residues
- Chains
- 1
- Method
- solid-state nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Outer membrane protein alkl
- UniProt
- Q00595
- Pockets
- 2 · best druggability 0.81
Structure
solid-state nmr · 1 distinct chain · 2% helix, 53% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Outer membrane protein alkl | protein | 211 | 2% helix, 53% strand | Q00595 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 612 | 0.81 | 0.86 | 82 | empty |
| 2 | 153 | 0.57 | 0.82 | 31 | empty |
Compared structures
- 6QWR · Solid-state NMR structure of outer membrane protein AlkL in DMPC lipid bilayers · the same entry in another collection · chain A against A, TM-score 1.00
- Q00595 · AlphaFold monomer V2.0 prediction for outer membrane protein alkl (Q00595) · a predicted model of the same protein · chain A against A, TM-score 0.73
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q00595
- Elsewhere: RCSB PDB 6QWR · PDBe 6QWR · UniProt Q00595
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