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Structure and function of the toscana virus cap snatching endonuclease

Analyse Structure and function of the toscana virus cap snatching endonuclease in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6QW5
Type
protein
Length
397 residues
Chains
2
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt
S4ZA26
Ligands
XI7, MN, SO4

Structure

x-ray diffraction · 2 distinct chains.

ChainMoleculeTypeResiduesSecondary structureUniProt
A—protein204—S4ZA26
B—protein193—S4ZA26

Ligands and binding sites

  • XI7 · 2-4-dioxo-4-phenylbutanoic acid · ligand · 2 copies · chains A, B
  • MN · Manganese (II) ion · metal · 4 copies · chains A, B
  • SO4 · Sulfate ion · ion · 4 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6QW5 · Structure and function of the toscana virus cap snatching endonuclease · the same entry in another collection · chain A against A, TM-score 1.00

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