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Cryogenic temperature structure of the ground state of ATPHOT2LOV2 recorded after an accumulated dose of 2.68 mgy

Analyse Cryogenic temperature structure of the ground state of ATPHOT2LOV2 recorded… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6QQH
Type: protein
Length: 117 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Phototropin-2
EC: 2.7.11.1
UniProt: P93025
Ligands: FMN
Pockets: 1 · best druggability 0.72

Structure

x-ray diffraction · 1 distinct chain · 27% helix, 32% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Phototropin-2 (EC 2.7.11.1)	protein	117	27% helix, 32% strand	P93025

Ligands and binding sites

FMN · Flavin mononucleotide · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	172	0.72	0.89	24	FMN

Compared structures

6QQH · Cryogenic temperature structure of the ground state of AtPhot2LOV2 recorded after an… · the same entry in another collection · chain A against A, TM-score 1.00
P93025 · AlphaFold monomer V2.0 prediction for phototropin-2 (P93025) · a predicted model of the same protein · chain A against A, TM-score 0.92

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P93025
Elsewhere: RCSB PDB 6QQH · PDBe 6QQH · UniProt P93025

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