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Crystal structure of chaetomium thermophilum KTI12 in complex with ADP-ALF3

Analyse Crystal structure of chaetomium thermophilum KTI12 in complex with ADP-ALF3 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6QP0
Type: protein
Length: 188 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Putative chromatin binding protein
UniProt: G0SHI1
Ligands: ADP, AF3, MG
Pockets: 1 · best druggability 0.59

Structure

x-ray diffraction · 1 distinct chain · 45% helix, 15% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Putative chromatin binding protein	protein	188	45% helix, 15% strand	G0SHI1

Ligands and binding sites

ADP · Adenosine-5'-diphosphate · ligand · chains A
AF3 · Aluminum fluoride · ligand · chains A
MG · Magnesium ion · metal · chains A
MES · 2-(N-morpholino)-ethanesulfonic acid · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	102	0.59	0.87	25	ADP, AF3, MG

Compared structures

6QP0 · Crystal structure of Chaetomium thermophilum Kti12 in complex with ADP-AlF3 · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt G0SHI1
Elsewhere: RCSB PDB 6QP0 · PDBe 6QP0 · UniProt G0SHI1

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