Research workbench
Re-refinement of 6ESR human IBA57 at 1.75 a resolution
Analyse Re-refinement of 6ESR human IBA57 at 1.75 a resolution in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6QE3
- Type
- protein
- Length
- 309 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Putative transferase CAF17, mitochondrial
- EC
- 2.1.-.-
- UniProt
- Q5T440
- Pockets
- 4 · best druggability 0.47
Structure
x-ray diffraction · 1 distinct chain · 17% helix, 32% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Putative transferase CAF17, mitochondrial (EC 2.1.-.-) | protein | 309 | 17% helix, 32% strand | Q5T440 |
Pockets
4 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 209 | 0.47 | 0.74 | 38 | empty |
| 2 | 97 | 0.45 | 0.80 | 19 | empty |
| 3 | 67 | 0.31 | 0.75 | 17 | empty |
| 4 | 53 | 0.27 | 0.74 | 13 | empty |
Compared structures
- 6QE3 · Re-refinement of 6ESR human IBA57 at 1.75 A resolution · the same entry in another collection · chain A against A, TM-score 1.00
- Q5T440 · AlphaFold monomer V2.0 prediction for putative transferase CAF17, mitochondrial (Q5T440) · a predicted model of the same protein · chain A against A, TM-score 0.97
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5T440
- Elsewhere: RCSB PDB 6QE3 · PDBe 6QE3 · UniProt Q5T440
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