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Crystal structure of C39S mutant of thioredoxin H1 from chlamydomonas reinhardtii

Analyse Crystal structure of C39S mutant of thioredoxin H1 from chlamydomonas… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6Q6U
Type: protein
Length: 221 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Thioredoxin H-type
UniProt: P80028
Pockets: 1 · best druggability 0.35

Structure

x-ray diffraction · 2 distinct chains · 44% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Thioredoxin H-type	protein	111	44% helix, 26% strand	P80028
B	Thioredoxin H-type	protein	110	44% helix, 26% strand	P80028

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	50	0.35	0.79	15	empty

Interfaces

1 interface between chains.

A–B · 606 Å² buried · 6 hydrogen bonds · protein-protein

Compared structures

6Q6U · Crystal structure of C39S mutant of thioredoxin h1 from Chlamydomonas reinhardtii · the same entry in another collection · chain A against A, TM-score 1.00
P80028 · AlphaFold monomer V2.0 prediction for thioredoxin H-type (P80028) · a predicted model of the same protein · chain B against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P80028
Elsewhere: RCSB PDB 6Q6U · PDBe 6Q6U · UniProt P80028

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