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Structure of RNA polymerase binding protein and transcriptional regulator dks from chlamydia trachomatis L2 (LGV434)
Analyse Structure of RNA polymerase binding protein and transcriptional regulator dks… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6PTG
- Type
- protein
- Length
- 171 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Dnak suppressor
- Pockets
- 1 · best druggability 0.33
Structure
x-ray diffraction · 2 distinct chains · 66% helix, 2% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Dnak suppressor | protein | 85 | 66% helix, 2% strand | — |
| B | Dnak suppressor | protein | 86 | 66% helix, 2% strand | — |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 84 | 0.33 | 0.73 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 416 Ų buried · 2 hydrogen bonds · protein-protein
Compared structures
- 6PTG · Structure of RNA polymerase binding protein and transcriptional regulator Dks from… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6PTG · PDBe 6PTG
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