Adduct formed after 1 month in the reaction of DICHLORIDO(1,3- dimethylbenzimidaz ol-2-YLIDENE)(ETA5-pentamethylcyclopentadienyl) RHODIUM(III) with hewl

Structure

x-ray diffraction · 1 distinct chain · 41% helix, 11% strand (DSSP).

Ligands and binding sites

• ORS · dichloro[(1,2,3,4,5-eta)-pentamethylcyclopentadienyl]rhodium · ligand · chains A
• R1N · 2-(1-chloranyl-2,3,4,5,6-pentamethyl-1$l^{7}-rhodapentacyclo[2.2.0.0^{1,3}.0^{1,5}.0^{2,6}]hexan-1-yl)-1,3-dimethyl-benzimidazole · ligand · chains A
• NA · Sodium ion · metal · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Modifications

Observed in the structure: 4 disulfide (disulfide).

Compared structures

• 6PL9 · Adduct formed after 1 month in the reaction of dichlorido(1,3-dimethylbenzimidaz… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

• Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
• Every structure of UniProt B8YK79
• Elsewhere: RCSB PDB 6PL9 · PDBe 6PL9 · UniProt B8YK79