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N5-carboxyaminoimidazole ribonucleotide synthetase from E. COLI

Analyse N5-carboxyaminoimidazole ribonucleotide synthetase from E. COLI in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1B6R
Type: protein
Length: 349 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (N5-carboxyaminoimidazole ribonucleotide synthetase)
EC: 4.1.1.21
UniProt: P09029
Ligands: SO4
Pockets: 1 · best druggability 0.58

Structure

x-ray diffraction · 1 distinct chain · 34% helix, 29% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein (N5-carboxyaminoimidazole ribonucleotide synthetase) (EC 4.1.1.21)	protein	349	34% helix, 29% strand	P09029

Ligands and binding sites

SO4 · Sulfate ion · ion · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	434	0.58	0.75	46	SO4

Compared structures

1B6R · N5-carboxyaminoimidazole ribonucleotide synthetase from E. COLI · the same entry in another collection · chain A against A, TM-score 1.00
P09029 · AlphaFold monomer V2.0 prediction for N5-carboxyaminoimidazole ribonucleotide synthase… · a predicted model of the same protein · chain A against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P09029
Elsewhere: RCSB PDB 1B6R · PDBe 1B6R · UniProt P09029

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