Research workbench
MSP1-substrate complex in open conformation
Analyse MSP1-substrate complex in open conformation in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6PDY
- Type
- protein
- Length
- 1,660 residues
- Chains
- 7
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- G0S654
- Ligands
- ADP, BEF, MG
Structure
electron microscopy · 7 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| F | — | protein | 236 | — | G0S654 |
| A | — | protein | 262 | — | G0S654 |
| B | — | protein | 282 | — | G0S654 |
| C | — | protein | 298 | — | G0S654 |
| D | — | protein | 293 | — | G0S654 |
| E | — | protein | 279 | — | G0S654 |
| G | — | protein | 10 | — | — |
Ligands and binding sites
- ADP · Adenosine-5'-diphosphate · ligand · 5 copies · chains A, B, C, D, E, F
- BEF · Beryllium trifluoride ion · ligand · 4 copies · chains A, B, C, D, E
- MG · Magnesium ion · metal · 4 copies · chains A, B, C, D
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PDY · Msp1-substrate complex in open conformation · the same entry in another collection · chain F against F, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt G0S654
- Elsewhere: RCSB PDB 6PDY · PDBe 6PDY · UniProt G0S654
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