Research workbench
Vaccine-elicited nhp fp-targeting antibody 0PV-A.04 in complex with HIV fusion peptide (residue 512-519)
Analyse Vaccine-elicited nhp fp-targeting antibody 0PV-A.04 in complex with HIV fusion… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6PDS
- Type
- protein
- Length
- 877 residues
- Chains
- 6
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Ligands
- SO4
Structure
x-ray diffraction · 5 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, L | — | protein | 212 | — | — |
| B | — | protein | 220 | — | — |
| H | — | protein | 218 | — | — |
| G | — | protein | 7 | — | — |
| C | — | protein | 8 | — | — |
Ligands and binding sites
- SO4 · Sulfate ion · ion · 4 copies · chains A, B, H, L
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6PDS · Vaccine-elicited NHP FP-targeting antibody 0PV-a.04 in complex with HIV fusion peptide… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6PDS · PDBe 6PDS
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