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Pseudopaline dehydrogenase with (R)-pseudopaline soaked 1 hour

Analyse Pseudopaline dehydrogenase with (R)-pseudopaline soaked 1 hour in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6PBN
Type: protein
Length: 848 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: Q9HUX5
Ligands: NAP, AKG, O77

Structure

x-ray diffraction · 2 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	425	—	Q9HUX5
B	—	protein	423	—	Q9HUX5

Ligands and binding sites

NAP · Nadp nicotinamide-adenine-dinucleotide phosphate · ligand · 2 copies · chains A, B
AKG · 2-oxoglutaric acid · ligand · chains A
O77 · N-[(3S)-3-amino-3-carboxypropyl]-L-histidine · ligand · chains A
EDO · 1,2-ethanediol · additive · 5 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6PBN · Pseudopaline Dehydrogenase with (R)-Pseudopaline Soaked 1 hour · the same entry in another collection · chain A against A, TM-score 1.00
Q9HUX5 · AlphaFold monomer V2.0 prediction for pseudopaline synthase (Q9HUX5) · a predicted model of the same protein · chain B against A, TM-score 0.99

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9HUX5
Elsewhere: RCSB PDB 6PBN · PDBe 6PBN · UniProt Q9HUX5

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