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Crystal structure of unsaturated fatty acid bound toxt K231A from vibrio cholerae strain SCE256

Analyse Crystal structure of unsaturated fatty acid bound toxt K231A from vibrio… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6PB9
Type: protein
Length: 276 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Toxin co-regulated pilus virulence regulatory protein
UniProt: Q9F5Q9
Ligands: PAM
Pockets: 3 · best druggability 0.77

Structure

x-ray diffraction · 1 distinct chain · 42% helix, 22% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Toxin co-regulated pilus virulence regulatory protein	protein	276	42% helix, 22% strand	Q9F5Q9

Ligands and binding sites

PAM · Palmitoleic acid · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	388	0.77	0.86	51	PAM
2	99	0.42	0.78	23	empty
3	70	0.37	0.78	16	empty

Compared structures

6PB9 · Crystal structure of unsaturated fatty acid bound ToxT K231A from Vibrio cholerae strain… · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9F5Q9
Elsewhere: RCSB PDB 6PB9 · PDBe 6PB9 · UniProt Q9F5Q9

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