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Structure of E. COLI MS115-1 nucc, apo form

Analyse Structure of E. COLI MS115-1 nucc, apo form in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB
6P7O
Type
protein
Length
225 residues
Chains
1
Method
x-ray diffraction
Collection
MolNFT v1 / PDB
Contract
0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner
0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule
E. COLI MS115-1 nucc
UniProt
D7Y2H5
Ligands
MG, CL

Structure

x-ray diffraction · 1 distinct chain · 32% helix, 28% strand (DSSP).

ChainMoleculeTypeResiduesSecondary structureUniProt
AE. COLI MS115-1 nuccprotein22532% helix, 28% strandD7Y2H5

Ligands and binding sites

  • MG · Magnesium ion · metal · chains A
  • CL · Chloride ion · ion · chains A
  • P6G · Hexaethylene glycol · additive · chains A
  • PGE · Triethylene glycol · additive · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

  • 6P7O · Structure of E. coli MS115-1 NucC, Apo form · the same entry in another collection · chain A against A, TM-score 1.00
  • D7Y2H5 · AlphaFold monomer V2.0 prediction for endodeoxyribonuclease nucc (D7Y2H5) · a predicted model of the same protein · chain A against A, TM-score 0.93

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