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Crystal structure of the fowlpox virus holliday junction resolvase

Analyse Crystal structure of the fowlpox virus holliday junction resolvase in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6P7A
Type: protein
Length: 289 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Holliday junction resolvase
UniProt: A0A385H9X4
Ligands: CD
Pockets: 2 · best druggability 0.35

Structure

x-ray diffraction · 2 distinct chains · 43% helix, 23% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Holliday junction resolvase	protein	145	43% helix, 23% strand	A0A385H9X4
B	Holliday junction resolvase	protein	144	43% helix, 23% strand	A0A385H9X4

Ligands and binding sites

CD · Cadmium ion · metal · 6 copies · chains A, B

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	100	0.35	0.74	22	CD
2	64	0.32	0.76	16	empty

Interfaces

1 interface between chains.

A–B · 738 Å² buried · 7 hydrogen bonds · protein-protein

Compared structures

6P7A · Crystal structure of the fowlpox virus holliday junction resolvase · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A385H9X4
Elsewhere: RCSB PDB 6P7A · PDBe 6P7A · UniProt A0A385H9X4

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