Research workbench
Crystal structure of a glucose-6-phosphate isomerase from chlamydia trachomatis D/UW-3/CX
Analyse Crystal structure of a glucose-6-phosphate isomerase from chlamydia trachomatis… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6OTU
- Type
- protein
- Length
- 517 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Glucose-6-phosphate isomerase
- EC
- 5.3.1.9
- UniProt
- A0A0E9E8R5
- Ligands
- G6Q
- Pockets
- 3 · best druggability 0.61
Structure
x-ray diffraction · 1 distinct chain · 51% helix, 14% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Glucose-6-phosphate isomerase (EC 5.3.1.9) | protein | 517 | 51% helix, 14% strand | A0A0E9E8R5 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 247 | 0.61 | 0.81 | 38 | G6Q |
| 2 | 153 | 0.48 | 0.77 | 25 | empty |
| 3 | 57 | 0.33 | 0.77 | 14 | empty |
Compared structures
- 6OTU · Crystal structure of a glucose-6-phosphate isomerase from Chlamydia trachomatis D/UW-3/Cx · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0E9E8R5
- Elsewhere: RCSB PDB 6OTU · PDBe 6OTU · UniProt A0A0E9E8R5
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.