Research workbench
Riam ra-pH core structure in the P212121 space group
Analyse Riam ra-pH core structure in the P212121 space group in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6OLU
- Type
- protein
- Length
- 244 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Amyloid beta A4 precursor protein-binding family B member 1-interacting protein
- UniProt
- Q8R5A3
- Pockets
- 2 · best druggability 0.32
Structure
x-ray diffraction · 1 distinct chain · 28% helix, 30% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Amyloid beta A4 precursor protein-binding family B member 1-interacting protein | protein | 244 | 28% helix, 30% strand | Q8R5A3 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 61 | 0.32 | 0.77 | 18 | empty |
| 2 | 69 | 0.29 | 0.73 | 14 | empty |
Compared structures
- 6OLU · RIAM RA-PH core structure in the P212121 space group · the same entry in another collection · chain A against A, TM-score 1.00
- Q8R5A3 · AlphaFold monomer V2.0 prediction for amyloid beta A4 precursor protein-binding family B… · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8R5A3
- Elsewhere: RCSB PDB 6OLU · PDBe 6OLU · UniProt Q8R5A3
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