Research workbench

Birch pollen allergen bet V 1

Analyse Birch pollen allergen bet V 1 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1B6F
Type: protein
Length: 159 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Protein (major pollen allergen bet V 1-a)
UniProt: P15494
Pockets: 1 · best druggability 0.78

Structure

solution nmr · 1 distinct chain · 25% helix, 33% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Protein (major pollen allergen bet V 1-a)	protein	159	25% helix, 33% strand	P15494

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	517	0.78	0.85	51	empty

Compared structures

1B6F · Birch pollen allergen bet V 1 · the same entry in another collection · chain A against A, TM-score 1.00
P15494 · AlphaFold monomer V2.0 prediction for major pollen allergen bet V 1-a (P15494) · a predicted model of the same protein · chain A against A, TM-score 0.85

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P15494
Elsewhere: RCSB PDB 1B6F · PDBe 1B6F · UniProt P15494

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