Research workbench
Herpes simplex virus type 1 (HSV-1) portal vertex-adjacent CAPSID/CATC, asymmetric unit
Analyse Herpes simplex virus type 1 (HSV-1) portal vertex-adjacent CAPSID/CATC… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6ODM
- Type
- protein
- Length
- 8,562 residues
- Chains
- 19
- Method
- electron microscopy
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- H9E925, Q25BW6, Q1T724, G8H8D9, F8REV0, D3YPI2, A0A0B5E3K2
Structure
electron microscopy · 13 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| T | — | protein | 1369 | — | H9E925 |
| W | — | protein | 1367 | — | H9E925 |
| S | — | protein | 1328 | — | H9E925 |
| X | — | protein | 1310 | — | H9E925 |
| L, P, E, F | — | protein | 101 | — | Q25BW6 |
| 5 | — | protein | 387 | — | Q1T724 |
| 6, H | — | protein | 291 | — | G8H8D9 |
| 7, A | — | protein | 310 | — | G8H8D9 |
| C | — | protein | 565 | — | F8REV0 |
| G | — | protein | 92 | — | D3YPI2 |
| K | — | protein | 79 | — | D3YPI2 |
| O, B | — | protein | 48 | — | A0A0B5E3K2 |
| D | — | protein | 363 | — | Q1T724 |
Compared structures
- 6ODM · Herpes simplex virus type 1 (HSV-1) portal vertex-adjacent capsid/CATC, asymmetric unit · the same entry in another collection · chain T against T, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt H9E925
- Every structure of UniProt Q25BW6
- Every structure of UniProt Q1T724
- Every structure of UniProt G8H8D9
- Every structure of UniProt F8REV0
- Every structure of UniProt D3YPI2
- Every structure of UniProt A0A0B5E3K2
- Elsewhere: RCSB PDB 6ODM · PDBe 6ODM · UniProt H9E925 · UniProt Q25BW6 · UniProt Q1T724 · UniProt G8H8D9 · UniProt F8REV0 · UniProt D3YPI2 · UniProt A0A0B5E3K2
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.