Research workbench
Sudan virus nucleoprotein core domain in complex with VP35 chaperoning peptide
Analyse Sudan virus nucleoprotein core domain in complex with VP35 chaperoning peptide in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6OAF
- Type
- protein
- Length
- 362 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Polymerase cofactor VP35,NUCLEOPROTEIN
- UniProt
- Q5XX07, Q9QP77
- Pockets
- 1 · best druggability 0.40
Structure
x-ray diffraction · 1 distinct chain · 56% helix, 7% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Polymerase cofactor VP35,NUCLEOPROTEIN | protein | 362 | 56% helix, 7% strand | Q5XX07, Q9QP77 |
Pockets
1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 79 | 0.40 | 0.79 | 19 | empty |
Compared structures
- 6OAF · Sudan virus nucleoprotein core domain in complex with VP35 chaperoning peptide · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q5XX07
- Every structure of UniProt Q9QP77
- Elsewhere: RCSB PDB 6OAF · PDBe 6OAF · UniProt Q5XX07 · UniProt Q9QP77
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