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Crystal structure of uvrb bound to duplex DNA

Analyse Crystal structure of uvrb bound to duplex DNA in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6O8F
Type: protein + DNA
Length: 1,262 residues
Chains: 6
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
UniProt: P56981
Ligands: MG, CL

Structure

x-ray diffraction · 4 distinct chains.

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	—	protein	591	—	P56981
B	—	protein	591	—	P56981
C, E	—	dna	20	—	—
D, F	—	dna	20	—	—

Ligands and binding sites

MG · Magnesium ion · metal · 4 copies · chains A
CL · Chloride ion · ion
ACT · Acetate ion · additive · chains A, C, D

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Compared structures

6O8F · Crystal structure of UvrB bound to duplex DNA · the same entry in another collection · chain F against F, TM-score 1.00
P56981 · AlphaFold monomer V2.0 prediction for uvrabc system protein B (P56981) · a predicted model of the same protein · chain A against A, TM-score 0.99

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Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P56981
Elsewhere: RCSB PDB 6O8F · PDBe 6O8F · UniProt P56981

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