Research workbench
Crystal structure of ppra filament from deinococcus peraridilitoris
Analyse Crystal structure of ppra filament from deinococcus peraridilitoris in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6O5L
- Type
- protein
- Length
- 271 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Ppra
- UniProt
- L0A1P5
- Pockets
- 7 · best druggability 0.55
Structure
x-ray diffraction · 1 distinct chain · 48% helix, 16% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Ppra | protein | 271 | 48% helix, 16% strand | L0A1P5 |
Pockets
7 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 200 | 0.55 | 0.79 | 20 | empty |
| 2 | 101 | 0.46 | 0.80 | 27 | empty |
| 3 | 89 | 0.45 | 0.80 | 24 | empty |
| 4 | 107 | 0.42 | 0.77 | 21 | empty |
| 5 | 98 | 0.41 | 0.77 | 18 | empty |
Modifications
Observed in the structure: 8 modified (engineered).
Compared structures
- 6O5L · Crystal structure of PprA filament from Deinococcus peraridilitoris · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt L0A1P5
- Elsewhere: RCSB PDB 6O5L · PDBe 6O5L · UniProt L0A1P5
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