Research workbench
Respiratory syncytial virus fusion protein N-terminal heptad repeat DOMAIN+VIQKI
Analyse Respiratory syncytial virus fusion protein N-terminal heptad repeat DOMAIN+VIQKI in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6NTX
- Type
- protein
- Length
- 143 residues
- Chains
- 4
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fusion glycoprotein F0
- UniProt
- A0A1U8ZTH8, A0A1V0BZ41
- Ligands
- ACE, NH2
Structure
x-ray diffraction · 4 distinct chains · 92% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Fusion glycoprotein F0 | protein | 43 | 95% helix, 0% strand | A0A1U8ZTH8 |
| B | Fusion glycoprotein F0 | protein | 39 | 95% helix, 0% strand | A0A1U8ZTH8 |
| C | Fusion glycoprotein F0 | protein | 34 | 88% helix, 0% strand | A0A1V0BZ41 |
| D | Fusion glycoprotein F0 | protein | 27 | 89% helix, 0% strand | A0A1V0BZ41 |
Ligands and binding sites
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
4 interfaces between chains.
- A–C · 722 Ų buried · 5 hydrogen bonds · protein-protein
- B–D · 468 Ų buried · 3 hydrogen bonds · protein-protein
- B–C · 223 Ų buried · 5 hydrogen bonds · protein-protein
- C–D · 148 Ų buried · 2 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 1 covalent (covalent ligand).
Compared structures
- 6NTX · Respiratory syncytial virus fusion protein N-terminal heptad repeat domain+VIQKI · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A1U8ZTH8
- Every structure of UniProt A0A1V0BZ41
- Elsewhere: RCSB PDB 6NTX · PDBe 6NTX · UniProt A0A1U8ZTH8 · UniProt A0A1V0BZ41
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.