Research workbench
Human neutrophil gelatinase-associated lipocalin (hngal), regularised average NMR structure
Analyse Human neutrophil gelatinase-associated lipocalin (hngal), regularised average… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1NGL
- Type
- protein
- Length
- 179 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Protein (ngal)
- UniProt
- P80188
- Pockets
- 5 · best druggability 0.73
Structure
solution nmr · 1 distinct chain · 13% helix, 41% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Protein (ngal) | protein | 179 | 13% helix, 41% strand | P80188 |
Pockets
5 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 81 | 0.73 | 0.95 | 21 | empty |
| 2 | 207 | 0.57 | 0.79 | 35 | empty |
| 3 | 63 | 0.49 | 0.85 | 23 | empty |
| 4 | 116 | 0.47 | 0.79 | 20 | empty |
| 5 | 58 | 0.32 | 0.75 | 17 | empty |
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 1NGL · Human neutrophil gelatinase-associated lipocalin (hngal), regularised average NMR… · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P80188
- Elsewhere: RCSB PDB 1NGL · PDBe 1NGL · UniProt P80188
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