Research workbench
Crystal structure of human CD160 and hvem complex
Analyse Crystal structure of human CD160 and hvem complex in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6NG3
- Type
- protein
- Length
- 203 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- CD160 ANTIGEN,TUMOR necrosis factor receptor superfamily member 14
- UniProt
- O95971, Q92956
- Ligands
- NAG, BMA, MG
Structure
x-ray diffraction · 1 distinct chain · 4% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | CD160 ANTIGEN,TUMOR necrosis factor receptor superfamily member 14 | protein | 203 | 4% helix, 48% strand | O95971, Q92956 |
Ligands and binding sites
- NAG · 2-acetamido-2-deoxy-beta-D-glucopyranose · sugar · 4 copies · chains A
- BMA · beta-D-mannopyranose · sugar · 2 copies
- MG · Magnesium ion · metal
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 10 disulfide, 2 glycan (disulfide, N-glycosylation).
Compared structures
- 6NG3 · Crystal structure of human CD160 and HVEM complex · the same entry in another collection · chain A against A, TM-score 1.00
- O95971 · AlphaFold monomer V2.0 prediction for CD160 antigen (O95971) · a predicted model of the same protein · chain A against A, TM-score 0.52
- Q92956 · AlphaFold monomer V2.0 prediction for tumor necrosis factor receptor superfamily member… · a predicted model of the same protein · chain A against A, TM-score 0.46
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O95971
- Every structure of UniProt Q92956
- Elsewhere: RCSB PDB 6NG3 · PDBe 6NG3 · UniProt O95971 · UniProt Q92956
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