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Crystal structure of ATPase delta 1-79 SPA47 R189E
Analyse Crystal structure of ATPase delta 1-79 SPA47 R189E in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6N6Z
- Type
- protein
- Length
- 668 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Probable ATP synthase SPAL/MXIB
- EC
- 7.1.2.2
- UniProt
- P0A1C1
- Pockets
- 10 · best druggability 0.69
Structure
x-ray diffraction · 2 distinct chains · 44% helix, 21% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Probable ATP synthase SPAL/MXIB (EC 7.1.2.2) | protein | 334 | 43% helix, 21% strand | P0A1C1 |
| B | Probable ATP synthase SPAL/MXIB (EC 7.1.2.2) | protein | 334 | 45% helix, 21% strand | P0A1C1 |
Pockets
10 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 835 | 0.69 | 0.76 | 80 | empty |
| 2 | 154 | 0.57 | 0.82 | 26 | empty |
| 3 | 90 | 0.52 | 0.83 | 17 | empty |
| 4 | 105 | 0.49 | 0.81 | 20 | empty |
| 5 | 92 | 0.39 | 0.76 | 19 | empty |
Interfaces
1 interface between chains.
- A–B · 397 Ų buried · 6 hydrogen bonds · protein-protein
Compared structures
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt P0A1C1
- Elsewhere: RCSB PDB 6N6Z · PDBe 6N6Z · UniProt P0A1C1
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