Research workbench
Crystal structure of kelch domain of the human NS1 binding protein
Analyse Crystal structure of kelch domain of the human NS1 binding protein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6N3H
- Type
- protein
- Length
- 580 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Influenza virus NS1A-binding protein
- UniProt
- Q9Y6Y0
- Pockets
- 2 · best druggability 0.74
Structure
x-ray diffraction · 2 distinct chains · 0% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Influenza virus NS1A-binding protein | protein | 304 | 0% helix, 50% strand | Q9Y6Y0 |
| B | Influenza virus NS1A-binding protein | protein | 276 | 0% helix, 49% strand | Q9Y6Y0 |
Pockets
2 pockets found on a 1 Å grid, 2 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 405 | 0.74 | 0.85 | 35 | empty |
| 2 | 457 | 0.72 | 0.82 | 51 | empty |
Compared structures
- 6N3H · Crystal structure of Kelch domain of the human NS1 binding protein · the same entry in another collection · chain A against A, TM-score 1.00
- Q9Y6Y0 · AlphaFold monomer V2.0 prediction for influenza virus NS1A-binding protein (Q9Y6Y0) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q9Y6Y0
- Elsewhere: RCSB PDB 6N3H · PDBe 6N3H · UniProt Q9Y6Y0
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