Research workbench
Zebrafish betaglycan orphan domain structure from tetragonal crystal form
Analyse Zebrafish betaglycan orphan domain structure from tetragonal crystal form in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6MZN
- Type
- protein
- Length
- 309 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Transforming growth factor beta receptor III
- UniProt
- A0A0H3UK16
- Pockets
- 2 · best druggability 0.37
Structure
x-ray diffraction · 1 distinct chain · 10% helix, 47% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Transforming growth factor beta receptor III | protein | 309 | 10% helix, 47% strand | A0A0H3UK16 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 62 | 0.37 | 0.79 | 15 | empty |
| 2 | 58 | 0.27 | 0.73 | 15 | empty |
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 6MZN · Zebrafish betaglycan orphan domain structure from tetragonal crystal form · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0H3UK16
- Elsewhere: RCSB PDB 6MZN · PDBe 6MZN · UniProt A0A0H3UK16
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