Research workbench
F9 pilus adhesin fmlh lectin domain from E. COLI UTI89 in complex with galactoside 5-nitro-2'-{[(2S,3R,4S,5R,6R)-3,4,5-trihydroxy-6- (HYDROXYMETHYL)OXAN-2-YL]OXY}-[1,1'-biphenyl]-3-carboxylic acid
Analyse F9 pilus adhesin fmlh lectin domain from E. COLI UTI89 in complex with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6MAP
- Type
- protein
- Length
- 154 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fimbrial adhesin fmld
- UniProt
- J7QR14
- Ligands
- JC4, SO4
Structure
x-ray diffraction · 1 distinct chain · 4% helix, 48% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | Fimbrial adhesin fmld | protein | 154 | 4% helix, 48% strand | J7QR14 |
Ligands and binding sites
- JC4 · 2'-(beta-D-galactopyranosyloxy)-5-nitro[1,1'-biphenyl]-3-carboxylic acid · ligand · 2 copies · chains B
- SO4 · Sulfate ion · ion · 2 copies · chains B
- GOL · Glycerol · additive · 2 copies · chains B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Modifications
Observed in the structure: 1 disulfide (disulfide).
Compared structures
- 6MAP · F9 Pilus Adhesin FmlH Lectin Domain from E. coli UTI89 in Complex with Galactoside… · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J7QR14
- Elsewhere: RCSB PDB 6MAP · PDBe 6MAP · UniProt J7QR14
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