Research workbench
X-ray structure of branchiostoma floridae fluorescent protein LANFP6G
Analyse X-ray structure of branchiostoma floridae fluorescent protein LANFP6G in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6M9Z
- Type
- protein
- Length
- 436 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Fluorescent protein LANFP6G
- UniProt
- C3YRA1
- Pockets
- 3 · best druggability 0.34
Structure
x-ray diffraction · 1 distinct chain · 10% helix, 58% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, D | Fluorescent protein LANFP6G | protein | 218 | 10% helix, 58% strand | C3YRA1 |
Pockets
3 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 58 | 0.34 | 0.77 | 12 | empty |
| 2 | 74 | 0.28 | 0.72 | 16 | empty |
| 3 | 55 | 0.27 | 0.74 | 14 | empty |
Interfaces
1 interface between chains.
- A–D · 981 Ų buried · 18 hydrogen bonds · protein-protein
Compared structures
- 6M9Z · X-ray Structure of Branchiostoma floridae fluorescent protein lanFP6G · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt C3YRA1
- Elsewhere: RCSB PDB 6M9Z · PDBe 6M9Z · UniProt C3YRA1
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