Research workbench
Crystal structure of ubix-like FMN prenyltransferase MJ0101 from methanocaldococcus jannaschii, FMN complex
Analyse Crystal structure of ubix-like FMN prenyltransferase MJ0101 from… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6M8V
- Type
- protein
- Length
- 183 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Flavin prenyltransferase ubix
- EC
- 2.5.1.129
- UniProt
- Q57566
- Ligands
- FMN, PO4
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 17% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Flavin prenyltransferase ubix (EC 2.5.1.129) | protein | 183 | 42% helix, 17% strand | Q57566 |
Ligands and binding sites
- FMN · Flavin mononucleotide · ligand · chains A
- PO4 · Phosphate ion · ion · chains A
- GOL · Glycerol · additive · 3 copies · chains A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6M8V · Crystal structure of UbiX-like FMN prenyltransferase MJ0101 from Methanocaldococcus… · the same entry in another collection · chain A against A, TM-score 1.00
- Q57566 · AlphaFold monomer V2.0 prediction for flavin prenyltransferase ubix (Q57566) · a predicted model of the same protein · chain A against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q57566
- Elsewhere: RCSB PDB 6M8V · PDBe 6M8V · UniProt Q57566
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