Research workbench
Crystal structure of ruvc from pseudomonas aeruginosa
Analyse Crystal structure of ruvc from pseudomonas aeruginosa in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6LW3
- Type
- protein
- Length
- 306 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Crossover junction endodeoxyribonuclease ruvc
- EC
- 3.1.22.4
- UniProt
- A0A0C7D4E1
- Pockets
- 3 · best druggability 0.50
Structure
x-ray diffraction · 1 distinct chain · 46% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | Crossover junction endodeoxyribonuclease ruvc (EC 3.1.22.4) | protein | 153 | 46% helix, 24% strand | A0A0C7D4E1 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 214 | 0.50 | 0.76 | 30 | empty |
| 2 | 118 | 0.39 | 0.75 | 21 | empty |
| 3 | 55 | 0.38 | 0.80 | 16 | empty |
Interfaces
1 interface between chains.
- A–B · 1047 Ų buried · 8 hydrogen bonds · protein-protein
Compared structures
- 6LW3 · Crystal structure of RuvC from Pseudomonas aeruginosa · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0C7D4E1
- Elsewhere: RCSB PDB 6LW3 · PDBe 6LW3 · UniProt A0A0C7D4E1
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