Research workbench
Crystal structure of a substrate binding protein from microbacterium hydrocarbonoxydans
Analyse Crystal structure of a substrate binding protein from microbacterium… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6LU2
- Type
- protein
- Length
- 481 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Substrate binding protein
- Pockets
- 3 · best druggability 0.77
Structure
x-ray diffraction · 1 distinct chain · 34% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Substrate binding protein | protein | 481 | 34% helix, 25% strand | — |
Pockets
3 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 960 | 0.77 | 0.79 | 90 | empty |
| 2 | 50 | 0.68 | 0.97 | 18 | empty |
| 3 | 175 | 0.54 | 0.80 | 34 | empty |
Modifications
Observed in the structure: 3 modified, 2 disulfide (engineered, disulfide).
Compared structures
- 6LU2 · Crystal structure of a substrate binding protein from Microbacterium hydrocarbonoxydans · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6LU2 · PDBe 6LU2
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