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Crystal structure of the borna disease virus nucleoprotein
Analyse Crystal structure of the borna disease virus nucleoprotein in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 1N93
- Type
- protein
- Length
- 335 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- P40 nucleoprotein
- UniProt
- Q01552
- Pockets
- 4 · best druggability 0.53
Structure
x-ray diffraction · 1 distinct chain · 55% helix, 4% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| X | P40 nucleoprotein | protein | 335 | 55% helix, 4% strand | Q01552 |
Pockets
4 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 163 | 0.53 | 0.80 | 20 | empty |
| 2 | 112 | 0.46 | 0.78 | 16 | empty |
| 3 | 66 | 0.34 | 0.77 | 14 | empty |
| 4 | 55 | 0.31 | 0.75 | 9 | empty |
Compared structures
- 1N93 · Crystal Structure of the Borna Disease Virus Nucleoprotein · the same entry in another collection · chain X against X, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q01552
- Elsewhere: RCSB PDB 1N93 · PDBe 1N93 · UniProt Q01552
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