Research workbench
Crystal structure of thsb
Analyse Crystal structure of thsb in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6LHY
- Type
- protein
- Length
- 350 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- DUF1863 domain-containing protein
- UniProt
- J8G8J6
- Pockets
- 2 · best druggability 0.41
Structure
x-ray diffraction · 2 distinct chains · 33% helix, 25% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | DUF1863 domain-containing protein | protein | 177 | 34% helix, 24% strand | J8G8J6 |
| B | DUF1863 domain-containing protein | protein | 173 | 33% helix, 25% strand | J8G8J6 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 123 | 0.41 | 0.76 | 22 | empty |
| 2 | 62 | 0.37 | 0.78 | 14 | empty |
Interfaces
1 interface between chains.
- A–B · 804 Ų buried · 6 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 modified (engineered).
Compared structures
- 6LHY · Crystal structure of ThsB · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt J8G8J6
- Elsewhere: RCSB PDB 6LHY · PDBe 6LHY · UniProt J8G8J6
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