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Tertiary structure of barnacle cement protein MRCP20

Analyse Tertiary structure of barnacle cement protein MRCP20 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6LEK
Type: protein
Length: 185 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Cement protein-20K
UniProt: Q9GRC4
Pockets: 3 · best druggability 0.64

Structure

solution nmr · 1 distinct chain · 12% helix, 9% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Cement protein-20K	protein	185	12% helix, 9% strand	Q9GRC4

Pockets

3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	64	0.64	0.93	22	empty
2	111	0.44	0.78	20	empty
3	66	0.27	0.73	15	empty

Modifications

Observed in the structure: 3 disulfide (disulfide).

Compared structures

6LEK · Tertiary structure of Barnacle cement protein MrCP20 · the same entry in another collection · chain A against A, TM-score 1.00
Q9GRC4 · AlphaFold monomer V2.0 prediction for cement protein 20 (Q9GRC4) · a predicted model of the same protein · chain A against A, TM-score 0.84

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q9GRC4
Elsewhere: RCSB PDB 6LEK · PDBe 6LEK · UniProt Q9GRC4

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