Research workbench
Solution structure of spa-2 shd
Analyse Solution structure of spa-2 shd in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6LAG
- Type
- protein
- Length
- 135 residues
- Chains
- 1
- Method
- solution nmr
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- SPA2-like protein
- UniProt
- V5IQM7
- Pockets
- 3 · best druggability 0.51
Structure
solution nmr · 1 distinct chain · 61% helix, 0% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | SPA2-like protein | protein | 135 | 61% helix, 0% strand | V5IQM7 |
Pockets
3 pockets found on a 1 Å grid, 1 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 154 | 0.51 | 0.78 | 28 | empty |
| 2 | 74 | 0.39 | 0.78 | 19 | empty |
| 3 | 76 | 0.37 | 0.77 | 19 | empty |
Compared structures
- 6LAG · Solution structure of SPA-2 SHD · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt V5IQM7
- Elsewhere: RCSB PDB 6LAG · PDBe 6LAG · UniProt V5IQM7
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