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Erbin PDZ domain bound to a phage-derived peptide

Analyse Erbin PDZ domain bound to a phage-derived peptide in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 1N7T
Type: protein
Length: 110 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: 99-mer peptide of densin-180-like protein; Phage-derived peptide
UniProt: Q96RT1

Structure

solution nmr · 2 distinct chains · 9% helix, 28% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	99-mer peptide of densin-180-like protein	protein	103	10% helix, 28% strand	Q96RT1
B	Phage-derived peptide	protein	7	0% helix, 29% strand	—

Interfaces

1 interface between chains.

A–B · 521 Å² buried · 6 hydrogen bonds · protein-protein

Compared structures

1N7T · ERBIN PDZ domain bound to a phage-derived peptide · the same entry in another collection · chain A against A, TM-score 1.00
Q96RT1 · AlphaFold monomer V2.0 prediction for erbin (Q96RT1) · a predicted model of the same protein · chain A against A, TM-score 0.83

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt Q96RT1
Elsewhere: RCSB PDB 1N7T · PDBe 1N7T · UniProt Q96RT1

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