Research workbench
Monomeric structure of monellin LOOP1 mutant with qepkg motif
Analyse Monomeric structure of monellin LOOP1 mutant with qepkg motif in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6L4I
- Type
- protein
- Length
- 175 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Single chain monellin
- Pockets
- 2 · best druggability 0.46
Structure
x-ray diffraction · 2 distinct chains · 19% helix, 50% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Single chain monellin | protein | 85 | 20% helix, 48% strand | — |
| B | Single chain monellin | protein | 90 | 19% helix, 51% strand | — |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 140 | 0.46 | 0.77 | 20 | empty |
| 2 | 82 | 0.34 | 0.74 | 21 | empty |
Interfaces
1 interface between chains.
- A–B · 501 Ų buried · 3 hydrogen bonds · protein-protein
Compared structures
- 6L4I · Monomeric structure of monellin loop1 mutant with QEPKG motif · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6L4I · PDBe 6L4I
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