Research workbench

MOEE5 in complex with udp-glucose and NAD

Analyse MOEE5 in complex with udp-glucose and NAD in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6KVC
Type: protein
Length: 299 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: MOEE5
UniProt: A0A003
Ligands: NAD, UPG
Pockets: 1 · best druggability 0.84

Structure

x-ray diffraction · 1 distinct chain · 40% helix, 20% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	MOEE5	protein	299	40% helix, 20% strand	A0A003

Ligands and binding sites

NAD · Nicotinamide-adenine-dinucleotide · ligand · chains A
UPG · Uridine-5'-diphosphate-glucose · ligand · chains A

Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	568	0.84	0.89	70	NAD, UPG

Compared structures

6KVC · MoeE5 in complex with UDP-glucose and NAD · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A003
Elsewhere: RCSB PDB 6KVC · PDBe 6KVC · UniProt A0A003

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