Research workbench
The structure of bioz from agrobacterium tumefaciens
Analyse The structure of bioz from agrobacterium tumefaciens in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6KUE
- Type
- protein
- Length
- 654 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- 3-oxoacyl-[acyl-carrier-protein] synthase III
- EC
- 2.3.1.41
- UniProt
- A0A0F4FMM6
- Pockets
- 6 · best druggability 0.79
Structure
x-ray diffraction · 1 distinct chain · 42% helix, 28% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A, B | 3-oxoacyl-[acyl-carrier-protein] synthase III (EC 2.3.1.41) | protein | 327 | 42% helix, 28% strand | A0A0F4FMM6 |
Pockets
6 pockets found on a 1 Å grid, 3 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 179 | 0.79 | 0.95 | 47 | empty |
| 2 | 302 | 0.75 | 0.87 | 41 | empty |
| 3 | 273 | 0.72 | 0.86 | 37 | empty |
| 4 | 60 | 0.28 | 0.74 | 22 | empty |
| 5 | 53 | 0.26 | 0.73 | 8 | empty |
Interfaces
1 interface between chains.
- A–B · 2880 Ų buried · 29 hydrogen bonds · protein-protein
Compared structures
- 6KUE · The structure of BioZ from Agrobacterium tumefaciens · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt A0A0F4FMM6
- Elsewhere: RCSB PDB 6KUE · PDBe 6KUE · UniProt A0A0F4FMM6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.