Research workbench

Crystal structure of the rrm domain of syncrip

Analyse Crystal structure of the rrm domain of syncrip in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6KOR
Type: protein
Length: 167 residues
Chains: 1
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Heterogeneous nuclear ribonucleoprotein Q
UniProt: O60506
Pockets: 1 · best druggability 0.31

Structure

x-ray diffraction · 1 distinct chain · 28% helix, 26% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Heterogeneous nuclear ribonucleoprotein Q	protein	167	28% helix, 26% strand	O60506

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	59	0.31	0.76	14	empty

Compared structures

6KOR · Crystal structure of the RRM domain of SYNCRIP · the same entry in another collection · chain A against A, TM-score 1.00
O60506 · AlphaFold monomer V2.0 prediction for heterogeneous nuclear ribonucleoprotein Q (O60506) · a predicted model of the same protein · chain A against A, TM-score 0.57

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt O60506
Elsewhere: RCSB PDB 6KOR · PDBe 6KOR · UniProt O60506

GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.