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Viral ubiquitin from autographa californica nucleo polyhedrosis virus

Analyse Viral ubiquitin from autographa californica nucleo polyhedrosis virus in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6KNA
Type: protein
Length: 76 residues
Chains: 1
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Viral ubiquitin
UniProt: A0A0N7CSW3
Pockets: 1 · best druggability 0.46

Structure

solution nmr · 1 distinct chain · 17% helix, 24% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Viral ubiquitin	protein	76	17% helix, 24% strand	A0A0N7CSW3

Pockets

1 pocket found on a 1 Å grid, 0 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	64	0.46	0.83	19	empty

Compared structures

6KNA · Viral Ubiquitin from Autographa californica Nucleo Polyhedrosis Virus · the same entry in another collection · chain A against A, TM-score 1.00

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt A0A0N7CSW3
Elsewhere: RCSB PDB 6KNA · PDBe 6KNA · UniProt A0A0N7CSW3

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