Research workbench
Crystal structure of rubisco accumulation factor RAF1 from anabaena sp. pcc 7120
Analyse Crystal structure of rubisco accumulation factor RAF1 from anabaena sp. pcc 7120 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6KKN
- Type
- protein
- Length
- 332 residues
- Chains
- 1
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- ALL5250 protein
- UniProt
- Q8YLP6
- Pockets
- 2 · best druggability 0.33
Structure
x-ray diffraction · 1 distinct chain · 43% helix, 15% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | ALL5250 protein | protein | 332 | 43% helix, 15% strand | Q8YLP6 |
Pockets
2 pockets found on a 1 Å grid, 0 with a druggability of 0.5 or more.
| Volume (ų) | Druggability | Buriedness | Lining residues | Inside | |
|---|---|---|---|---|---|
| 1 | 59 | 0.33 | 0.76 | 11 | empty |
| 2 | 62 | 0.30 | 0.74 | 19 | empty |
Compared structures
- 6KKN · Crystal structure of RuBisCO accumulation factor Raf1 from Anabaena sp. PCC 7120 · the same entry in another collection · chain A against A, TM-score 1.00
- Q8YLP6 · AlphaFold monomer V2.0 prediction for rubisco accumulation factor 1 (Q8YLP6) · a predicted model of the same protein · chain A against A, TM-score 0.56
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q8YLP6
- Elsewhere: RCSB PDB 6KKN · PDBe 6KKN · UniProt Q8YLP6
GL1X is a live explorer of the GenesisL1 blockchain. Turn on JavaScript for search, charts and interactive views.