Research workbench
Glycerol kinase form thermococcus kodakarensis, complex structure with substrate.
Analyse Glycerol kinase form thermococcus kodakarensis, complex structure with… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6K76
- Type
- protein
- Length
- 967 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- UniProt
- O93623
- Ligands
- ANP
Structure
x-ray diffraction · 2 distinct chains.
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | — | protein | 485 | — | O93623 |
| B | — | protein | 482 | — | O93623 |
Ligands and binding sites
- ANP · Phosphoaminophosphonic acid-adenylate ester · ligand · 2 copies · chains A, B
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Compared structures
- 6K76 · Glycerol kinase form Thermococcus kodakarensis, complex structure with substrate. · the same entry in another collection · chain A against A, TM-score 1.00
- O93623 · AlphaFold monomer V2.0 prediction for glycerol kinase (O93623) · a predicted model of the same protein · chain B against A, TM-score 0.99
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt O93623
- Elsewhere: RCSB PDB 6K76 · PDBe 6K76 · UniProt O93623
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