Research workbench
Application of anti-helix antibodies in protein structure determination (9014-1P4B)
Analyse Application of anti-helix antibodies in protein structure determination… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6K65
- Type
- protein
- Length
- 286 residues
- Chains
- 3
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- Immunoglobulin G-binding protein a; 1P4B variable light chain; 1P4B variable heavy chain
Structure
x-ray diffraction · 3 distinct chains · 22% helix, 42% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| A | Immunoglobulin G-binding protein a | protein | 58 | 86% helix, 0% strand | — |
| L | 1P4B variable light chain | protein | 115 | 5% helix, 53% strand | — |
| H | 1P4B variable heavy chain | protein | 113 | 5% helix, 51% strand | — |
Interfaces
3 interfaces between chains.
- L–H · 776 Ų buried · 5 hydrogen bonds · protein-protein
- A–H · 471 Ų buried · 8 hydrogen bonds · protein-protein
- A–L · 462 Ų buried · 5 hydrogen bonds · protein-protein
Modifications
Observed in the structure: 2 disulfide (disulfide).
Compared structures
- 6K65 · Application of anti-helix antibodies in protein structure determination (9014-1P4B) · the same entry in another collection · chain A against A, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Elsewhere: RCSB PDB 6K65 · PDBe 6K65
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