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Complex of SUMO2 with phosphorylated viral sim IE2

Analyse Complex of SUMO2 with phosphorylated viral sim IE2 in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6K5R
Type: protein
Length: 89 residues
Chains: 2
Method: solution nmr
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Small ubiquitin-related modifier 3; Asp-thr-ala-gly-cys-ile-val-ile-sep-asp-sep-glu
UniProt: P55854, P19893

Structure

solution nmr · 2 distinct chains · 12% helix, 34% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A	Small ubiquitin-related modifier 3	protein	77	14% helix, 32% strand	P55854
B	Asp-thr-ala-gly-cys-ile-val-ile-sep-asp-sep-glu	protein	12	0% helix, 42% strand	P19893

Interfaces

1 interface between chains.

A–B · 611 Å² buried · 10 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 2 modified (phosphorylation).

Compared structures

6K5R · Complex of SUMO2 with Phosphorylated viral SIM IE2 · the same entry in another collection · chain A against A, TM-score 1.00
P55854 · AlphaFold monomer V2.0 prediction for small ubiquitin-related modifier 3 (P55854) · a predicted model of the same protein · chain A against A, TM-score 0.90

Analyse

Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
Every structure of UniProt P55854
Every structure of UniProt P19893
Elsewhere: RCSB PDB 6K5R · PDBe 6K5R · UniProt P55854 · UniProt P19893

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