Research workbench
Lasso peptide synthetase B1 complexed with the leader peptide
Analyse Lasso peptide synthetase B1 complexed with the leader peptide in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.
- PDB
- 6JX3
- Type
- protein
- Length
- 103 residues
- Chains
- 2
- Method
- x-ray diffraction
- Collection
- MolNFT v1 / PDB
- Contract
- 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
- Owner
- 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
- Molecule
- TFUB1; Tfua-leader
- UniProt
- Q47QT5
- Ligands
- ZN
Structure
x-ray diffraction · 2 distinct chains · 38% helix, 24% strand (DSSP).
| Chain | Molecule | Type | Residues | Secondary structure | UniProt |
|---|---|---|---|---|---|
| B | TFUB1 | protein | 85 | 46% helix, 21% strand | Q47QT5 |
| A | Tfua-leader | protein | 18 | 0% helix, 39% strand | — |
Ligands and binding sites
- ZN · Zinc ion · metal · 7 copies · chains B, A
Binding sites are the residues within 4.5 Å of a ligand's heavy atoms.
Interfaces
1 interface between chains.
- B–A · 943 Ų buried · 20 hydrogen bonds · protein-protein
Compared structures
- 6JX3 · Lasso peptide synthetase B1 complexed with the leader peptide · the same entry in another collection · chain B against B, TM-score 1.00
Analyse
- Open in the research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides and crosslinks on the 3D structure
- Every structure of UniProt Q47QT5
- Elsewhere: RCSB PDB 6JX3 · PDBe 6JX3 · UniProt Q47QT5
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