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Crystal structure of odorant binding protein 4 in the natural predator chrysopa pallens

Analyse Crystal structure of odorant binding protein 4 in the natural predator chrysopa… in the GL1X research workbench: secondary structure, accessibility, pockets, interfaces, conservation, variants, modifications, peptides, crosslinks and neighbours on the 3D structure.

PDB: 6JPM
Type: protein
Length: 238 residues
Chains: 2
Method: x-ray diffraction
Collection: MolNFT v1 / PDB
Contract: 0xDE3723766Bc32dcACD03C17BaA400A7B36837Eba
Owner: 0x3396CDB397284571d12822B4ae1189a8E22AAAAA
Molecule: Odorant binding protein 4
UniProt: A0A0R8PDN4
Pockets: 1 · best druggability 0.83

Structure

x-ray diffraction · 1 distinct chain · 66% helix, 3% strand (DSSP).

Chain	Molecule	Type	Residues	Secondary structure	UniProt
A, B	Odorant binding protein 4	protein	119	66% helix, 3% strand	A0A0R8PDN4

Pockets

1 pocket found on a 1 Å grid, 1 with a druggability of 0.5 or more.

Pocket	Volume (Å³)	Druggability	Buriedness	Lining residues	Inside
1	726	0.83	0.86	76	empty

Interfaces

1 interface between chains.

A–B · 393 Å² buried · 0 hydrogen bonds · protein-protein

Modifications

Observed in the structure: 6 disulfide (disulfide).

Compared structures

6JPM · Crystal Structure of Odorant Binding Protein 4 in the Natural Predator Chrysopa pallens · the same entry in another collection · chain A against A, TM-score 1.00

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Every structure of UniProt A0A0R8PDN4
Elsewhere: RCSB PDB 6JPM · PDBe 6JPM · UniProt A0A0R8PDN4

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